STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAE86569.1Transcriptional regulator. (253 aa)    
Predicted Functional Partners:
GAE82064.1
Transcriptional regulator.
  
     0.761
GAE86401.1
Transcriptional regulator.
  
     0.736
GAE82923.1
Transcriptional regulator.
  
     0.705
GAE86472.1
Transcriptional regulator.
  
     0.690
GAE83141.1
Transcriptional regulator.
  
     0.650
GAE83285.1
Hypothetical protein.
  
  
  0.616
GAE83224.1
DNA-binding response regulator.
  
     0.611
GAE84769.1
Transcriptional regulator.
  
     0.575
GAE86335.1
Transcriptional regulator.
  
     0.570
GAE82924.1
Transcriptional regulator.
  
     0.544
Your Current Organism:
Bacteroides reticulotermitis
NCBI taxonomy Id: 1445607
Other names: B. reticulotermitis JCM 10512, Bacteroides reticulotermitis JCM 10512, Bacteroides sp. JCM 10512
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.