Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHI29591.1 | SHI29616.1 | SAMN05444417_0099 | SAMN05444417_0101 | Predicted arabinose efflux permease, MFS family. | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.823 |
| SHI29591.1 | SHI29638.1 | SAMN05444417_0099 | SAMN05444417_0103 | Predicted arabinose efflux permease, MFS family. | precorrin-6A/cobalt-precorrin-6A reductase. | 0.507 |
| SHI29591.1 | SHI29649.1 | SAMN05444417_0099 | SAMN05444417_0104 | Predicted arabinose efflux permease, MFS family. | DNA-3-methyladenine glycosylase II. | 0.759 |
| SHI29591.1 | SHI29661.1 | SAMN05444417_0099 | SAMN05444417_0105 | Predicted arabinose efflux permease, MFS family. | Phospholipase/carboxylesterase. | 0.754 |
| SHI29591.1 | SHI35449.1 | SAMN05444417_0099 | SAMN05444417_0416 | Predicted arabinose efflux permease, MFS family. | Cu(I)-responsive transcriptional regulator. | 0.412 |
| SHI29591.1 | SHI60164.1 | SAMN05444417_0099 | SAMN05444417_1183 | Predicted arabinose efflux permease, MFS family. | Protein of unknown function. | 0.427 |
| SHI29591.1 | SHI89379.1 | SAMN05444417_0099 | SAMN05444417_2196 | Predicted arabinose efflux permease, MFS family. | HlyD family secretion protein. | 0.414 |
| SHI29591.1 | SHJ02650.1 | SAMN05444417_0099 | SAMN05444417_2568 | Predicted arabinose efflux permease, MFS family. | Hypothetical protein. | 0.442 |
| SHI29591.1 | cbiD | SAMN05444417_0099 | SAMN05444417_0102 | Predicted arabinose efflux permease, MFS family. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.476 |
| SHI29591.1 | cobB | SAMN05444417_0099 | SAMN05444417_0100 | Predicted arabinose efflux permease, MFS family. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.829 |
| SHI29616.1 | SHI29591.1 | SAMN05444417_0101 | SAMN05444417_0099 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Predicted arabinose efflux permease, MFS family. | 0.823 |
| SHI29616.1 | SHI29638.1 | SAMN05444417_0101 | SAMN05444417_0103 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | precorrin-6A/cobalt-precorrin-6A reductase. | 0.783 |
| SHI29616.1 | SHI29649.1 | SAMN05444417_0101 | SAMN05444417_0104 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | DNA-3-methyladenine glycosylase II. | 0.509 |
| SHI29616.1 | SHI29661.1 | SAMN05444417_0101 | SAMN05444417_0105 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Phospholipase/carboxylesterase. | 0.508 |
| SHI29616.1 | cbiD | SAMN05444417_0101 | SAMN05444417_0102 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. | 0.709 |
| SHI29616.1 | cobB | SAMN05444417_0101 | SAMN05444417_0100 | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.937 |
| SHI29638.1 | SHI29591.1 | SAMN05444417_0103 | SAMN05444417_0099 | precorrin-6A/cobalt-precorrin-6A reductase. | Predicted arabinose efflux permease, MFS family. | 0.507 |
| SHI29638.1 | SHI29616.1 | SAMN05444417_0103 | SAMN05444417_0101 | precorrin-6A/cobalt-precorrin-6A reductase. | uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.783 |
| SHI29638.1 | SHI29649.1 | SAMN05444417_0103 | SAMN05444417_0104 | precorrin-6A/cobalt-precorrin-6A reductase. | DNA-3-methyladenine glycosylase II. | 0.839 |
| SHI29638.1 | SHI29661.1 | SAMN05444417_0103 | SAMN05444417_0105 | precorrin-6A/cobalt-precorrin-6A reductase. | Phospholipase/carboxylesterase. | 0.839 |
page 1 of 3