STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI33728.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
SHJ01780.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.895
SHI29931.1
Predicted extracellular nuclease.
    
 0.709
SHI33751.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.689
SHI33773.1
Urea transport system ATP-binding protein.
       0.689
SHI33795.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
       0.666
SHI78641.1
Carboxyl-terminal processing protease; Belongs to the peptidase S41A family.
   
   0.589
SHI33709.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.553
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.553
SHJ20087.1
Acyl carrier protein.
   
   0.553
SHI67321.1
Hypothetical protein.
  
 0.520
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.