STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI38341.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
SHJ20001.1
Sulfide dehydrogenase (flavocytochrome c), cytochrome c subunit.
  
 0.996
SHI63424.1
Cytochrome c oxidase cbb3-type subunit 2.
  
 0.993
SHI63336.1
Nitrogen fixation protein FixH.
  
 
 0.945
SHI32465.1
Cytochrome c, mono-and diheme variants.
  
 0.940
SHI35515.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.940
SHI38204.1
Cytochrome c.
  
 0.940
SHI63380.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.940
SHI63409.1
Cytochrome c oxidase cbb3-type subunit 4.
  
 
 0.915
SHJ19559.1
Cytochrome c oxidase subunit 2.
   
 0.906
SHJ19636.1
Cytochrome C oxidase, cbb3-type, subunit III.
  
 0.859
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.