STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI63855.1Carbon-monoxide dehydrogenase large subunit. (762 aa)    
Predicted Functional Partners:
SHI33562.1
Carbon-monoxide dehydrogenase small subunit.
 0.999
SHI36008.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.999
SHJ06215.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 0.997
SHI33540.1
Carbon-monoxide dehydrogenase medium subunit.
 
 0.996
SHI35990.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 0.992
SHI97676.1
Xanthine dehydrogenase small subunit.
  
  0.979
SHI38842.1
Hypothetical protein.
 
 
 0.873
SHI97696.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
  
  
 
0.866
SHI65043.1
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
  
 
 0.856
deoD
Purine-nucleoside phosphorylase.
     
  0.839
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.