STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI97817.1Putative ABC transport system permease protein. (836 aa)    
Predicted Functional Partners:
SHI97841.1
Putative ABC transport system ATP-binding protein.
 
     0.955
SHI97858.1
acyl-CoA thioesterase-1; Manually curated.
 
     0.934
SHI97803.1
Gamma-glutamyl cyclotransferase, AIG2-like.
       0.784
SHI86451.1
Predicted secreted hydrolase.
  
    0.746
SHI86428.1
Putative ABC transport system permease protein.
  
 
 0.597
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.525
SHI86412.1
Putative ABC transport system ATP-binding protein.
  
 
 0.525
SHI43973.1
Hypothetical protein.
  
 
 0.508
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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