STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI99008.1Peptide/nickel transport system permease protein. (356 aa)    
Predicted Functional Partners:
SHI98959.1
Peptide/nickel transport system ATP-binding protein.
 
  0.992
SHI99065.1
Peptide/nickel transport system substrate-binding protein.
  0.990
SHI98985.1
Peptide/nickel transport system permease protein.
 
  0.964
SHI98920.1
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component.
 
  0.917
SHI43629.1
Peptide/nickel transport system permease protein.
 
 
  0.850
SHI43673.1
Peptide/nickel transport system substrate-binding protein.
 
  0.845
SHJ28243.1
Peptide/nickel transport system permease protein.
 
 
  0.830
SHI43388.1
Peptide/nickel transport system permease protein.
 
 
  0.824
SHI98896.1
GAF domain-containing protein.
 
     0.799
SHI65666.1
Dipeptide transport system permease protein.
 
 
  0.798
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.