STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ01389.1Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain. (171 aa)    
Predicted Functional Partners:
SHI31862.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
    
   0.889
SHI33751.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
    
   0.889
SHI40848.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
    
   0.889
SHJ01366.1
L,D-transpeptidase catalytic domain.
 
     0.865
SHI67321.1
Hypothetical protein.
  
    0.786
SHI53819.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
  0.711
SHJ03696.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
  0.711
SHJ02543.1
Hypothetical protein.
  
     0.587
SHI29786.1
Hypothetical protein.
  
     0.535
SHI81861.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.