STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ13552.1Hypothetical protein. (438 aa)    
Predicted Functional Partners:
SHJ13633.1
Tight adherence protein C.
 
    0.944
SHJ13659.1
Type II secretion system protein F (GspF).
 
    0.933
SHJ13598.1
Tetratricopeptide repeat-containing protein.
 
     0.917
SHJ13573.1
Prepilin peptidase CpaA.
 
     0.915
SHJ13697.1
Pilus assembly protein CpaE.
 
    0.906
SHJ13753.1
Pilus assembly protein CpaB.
 
    0.856
SHJ13613.1
Tetratricopeptide repeat-containing protein.
 
     0.855
SHJ13679.1
Pilus assembly protein CpaF.
 
     0.851
SHJ05480.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
   
    0.836
SHJ13738.1
Pilus assembly protein CpaC; Belongs to the bacterial secretin family.
 
     0.818
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.