STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ20854.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (430 aa)    
Predicted Functional Partners:
SHJ20885.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.920
SHJ20905.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.911
SHJ20828.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
  0.810
SHI65458.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.748
SHI65476.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.742
SHI65505.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  
     0.712
SHI63139.1
Trehalose/maltose transport system permease protein.
  
  0.629
SHI85658.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  
  0.628
SHI63159.1
Trehalose/maltose transport system permease protein.
  
  0.626
SHI85685.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
  0.609
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.