STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ24069.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (316 aa)    
Predicted Functional Partners:
SHJ24093.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.978
SHJ24116.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
  0.958
SHI30673.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.917
SHI65458.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.911
SHJ20905.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.906
SHJ24051.1
Predicted dehydrogenase.
 
     0.904
SHI63139.1
Trehalose/maltose transport system permease protein.
 
  0.898
SHI33860.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.896
SHI34951.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.890
SHI29044.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.882
Your Current Organism:
Wenxinia saemankumensis
NCBI taxonomy Id: 1447782
Other names: CECT 8456, DSM 100565, KCTC 32548, W. saemankumensis, Wenxinia saemankumensis Park et al. 2014, Wenxinia sp. S-22, strain S-22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.