STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ78_01649NUC173 domain-containing protein. (1343 aa)    
Predicted Functional Partners:
AJ78_05758
Uncharacterized protein.
   
 
 0.997
AJ78_02017
Bms1-type G domain-containing protein.
   
 
 0.996
AJ78_07110
WD_REPEATS_REGION domain-containing protein.
   
 
 0.995
AJ78_05314
Uncharacterized protein.
   
 
 0.994
AJ78_02809
CBF domain-containing protein.
   
 
 0.994
AJ78_07338
Nucleolar protein 58.
   
 
 0.989
AJ78_01221
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.984
AJ78_05162
Utp12 domain-containing protein.
   
   0.977
AJ78_03851
Uncharacterized protein.
   
 
 0.976
AJ78_06677
Atypical/RIO/RIO2 protein kinase.
   
 
 0.976
Your Current Organism:
Emergomyces pasteurianus
NCBI taxonomy Id: 1447872
Other names: E. pasteurianus Ep9510, Emergomyces pasteuriana Ep9510, Emergomyces pasteurianus Ep9510, Emmonsia pasteuriana Ep9510, Emmonsia pasteuriana UAMH 9510
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.