STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (967 aa)    
Predicted Functional Partners:
AJ79_02075
Uncharacterized protein.
   
 0.963
AJ79_07932
Uncharacterized protein.
   
 0.961
AJ79_08754
ANAPC5 domain-containing protein.
   
 0.958
AJ79_08053
Uncharacterized protein.
    
 0.958
AJ79_02063
DOC domain-containing protein.
    
 0.956
AJ79_00006
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.955
AJ79_09405
RING-type domain-containing protein.
    
 0.947
AJ79_06917
BUB protein kinase.
    
 0.937
AJ79_08729
Valine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.876
AJ79_05891
HORMA domain-containing protein.
    
 0.872
Your Current Organism:
Helicocarpus griseus
NCBI taxonomy Id: 1447875
Other names: Ajellomyces grisea Sg5409, H. griseus UAMH5409, Helicocarpus griseus UAMH5409, Spiromastigoides grisea Sg5409, Spiromastix grisea Sg5409, Spiromastix grisea UAMH5409
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.