STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ80_02375Uncharacterized protein. (790 aa)    
Predicted Functional Partners:
AJ80_07316
Uncharacterized protein.
    
 0.813
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.718
AJ80_05610
WD_REPEATS_REGION domain-containing protein.
   
 0.718
AJ80_09248
Pre-rRNA-processing protein ipi1.
   
 0.692
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.648
AJ80_04422
CLP1_P domain-containing protein.
   
  0.616
AJ80_00596
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.609
AJ80_06281
Uncharacterized protein.
   
 0.600
AJ80_02726
CRIB domain-containing protein.
   
 0.600
AJ80_06030
CP-type G domain-containing protein.
   
  0.594
Your Current Organism:
Polytolypa hystricis
NCBI taxonomy Id: 1447883
Other names: P. hystricis UAMH7299, Polytolypa hystricis Ph7299, Polytolypa hystricis UAMH7299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.