STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ80_03420Uncharacterized protein. (548 aa)    
Predicted Functional Partners:
AJ80_07316
Uncharacterized protein.
    
 0.774
AJ80_09903
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.697
AJ80_00013
Uncharacterized protein.
    
 0.697
AJ80_03525
Uncharacterized protein.
    
 0.651
AJ80_04154
Uncharacterized protein.
    
 0.649
AJ80_05463
AGC/PKA protein kinase.
    
 0.643
AJ80_02774
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.642
AJ80_00864
Uncharacterized protein.
    
  0.640
AJ80_04064
40S ribosomal protein S20.
    
  0.639
AJ80_04247
E3 ubiquitin-protein ligase.
    
 0.638
Your Current Organism:
Polytolypa hystricis
NCBI taxonomy Id: 1447883
Other names: P. hystricis UAMH7299, Polytolypa hystricis Ph7299, Polytolypa hystricis UAMH7299
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