STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJ80_0315460S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (206 aa)    
Predicted Functional Partners:
AJ80_09680
40S ribosomal protein S19.
   
 
 0.999
AJ80_09123
60S ribosomal protein L20; Belongs to the eukaryotic ribosomal protein eL20 family.
   
 0.999
AJ80_09377
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
AJ80_08777
Uncharacterized protein.
   
 0.999
AJ80_08805
60S ribosomal protein L8-B.
  
 0.999
AJ80_08737
40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.999
AJ80_08623
60S ribosomal protein L24.
   
 0.999
AJ80_08097
60S ribosomal protein L10-A.
  
 0.999
AJ80_08519
Uncharacterized protein.
  
 0.999
AJ80_08457
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.999
Your Current Organism:
Polytolypa hystricis
NCBI taxonomy Id: 1447883
Other names: P. hystricis UAMH7299, Polytolypa hystricis Ph7299, Polytolypa hystricis UAMH7299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.