STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2N1N8Pectin lyase-like protein. (389 aa)    
Predicted Functional Partners:
A0A2T2N7I1
Uncharacterized protein.
    
  0.470
A0A2T2N7J6
Uncharacterized protein.
    
  0.470
A0A2T2NBH8
F-box domain-containing protein.
    
  0.470
A0A2T2NWQ0
mRNA triphosphatase CET1.
    
  0.470
A0A2T2P030
Uncharacterized protein.
    
  0.470
A0A2T2P7D2
Uncharacterized protein.
    
  0.470
A0A2T2P506
Uncharacterized protein.
     
 0.452
A0A2T2N683
Polyubiquitin.
   
  0.451
A0A2T2N1I2
BZIP domain-containing protein.
    
  0.408
A0A2T2NH80
Ubiquitin-domain-containing protein.
    
  0.408
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.