STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2N326FAD dependent oxidoreductase. (439 aa)    
Predicted Functional Partners:
A0A2T2N8C6
Dimethylglycine dehydrogenase.
  
 0.823
A0A2T2NTN1
PLP-dependent transferase.
  
 
 0.778
A0A2T2N756
Tryptophan synthase.
    
  0.744
A0A2T2NBQ1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.722
A0A2T2NH58
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
    
 0.722
A0A2T2P3A3
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.720
A0A2T2N273
Beta_elim_lyase domain-containing protein.
     
 0.717
A0A2T2NMI2
FAD dependent oxidoreductase.
   
 
 0.711
A0A2T2NZQ7
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.710
A0A2T2N9K7
FAD dependent oxidoreductase.
   
 
 0.625
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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