STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2N4H6Zn(2)-C6 fungal-type domain-containing protein. (786 aa)    
Predicted Functional Partners:
A0A2T2N8S2
Ubiquitin-like protein-like protein SMT3.
    
 0.926
A0A2T2N8V2
ULP_PROTEASE domain-containing protein.
    
 0.787
A0A2T2NES7
rRNA processing protein Ipi1.
    
 0.747
A0A2T2NBJ7
CLP1_P domain-containing protein.
    
 0.697
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
  0.693
A0A2T2NKX6
Las1-domain-containing protein.
   
  0.677
A0A2T2NLC7
Uncharacterized protein.
   
  0.677
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
 0.661
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
    
  0.657
A0A2T2NLK9
Ebp2-domain-containing protein.
   
  0.635
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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