STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2N5E2Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (208 aa)    
Predicted Functional Partners:
A0A2T2PBM4
Fibrillarin.
   
 
 0.978
A0A2T2NK83
RanBD1 domain-containing protein.
 
 
 0.943
A0A2T2NHP6
WD40 repeat-like protein.
   
 
 0.915
A0A2T2NPE9
Utp21-domain-containing protein.
   
 
 0.894
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.892
A0A2T2NEG5
NADH dehydrogenase I, D subunit; Belongs to the complex I 49 kDa subunit family.
   
   0.887
A0A2T2NXP2
Small nucleolar ribonucleo protein-like protein complex subunit.
   
 
 0.882
A0A2T2NQP4
U3 small nucleolar RNA-associated protein-like protein 15.
   
 
 0.881
A0A2T2NPZ9
WD40 repeat-like protein.
   
 
 0.878
A0A2T2NFQ0
NADH-quinone oxidoreductase.
   
   0.875
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.