STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2N6C1DUF1014-domain-containing protein. (221 aa)    
Predicted Functional Partners:
A0A2T2P9C0
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.928
A0A2T2NIU7
40S ribosomal protein S19.
   
 
 0.927
A0A2T2P6S1
WD40 repeat-like protein.
    
   0.926
A0A2T2N382
60S ribosomal protein L23.
   
   0.925
A0A2T2NCW1
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.925
A0A2T2NL91
Ribosomal_L18_c domain-containing protein.
   
   0.922
A0A2T2NRZ0
Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
   0.921
A0A2T2NXT2
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.921
A0A2T2NHB1
Ribosomal protein L5; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.915
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
   0.914
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.