STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NAL9Nitroreductase. (242 aa)    
Predicted Functional Partners:
A0A2T2NDF6
Flavo protein WrbA.
  
 
 0.899
A0A2T2NXC0
Uroporphyrin-III C-methyltransferas-like protein; Belongs to the precorrin methyltransferase family.
  
 
 0.886
A0A2T2NW41
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
     
 0.885
A0A2T2P1B9
Siroheme synthase middle domains-like protein.
    
 0.878
A0A2T2NFK5
Tetrapyrrole biosynthesis, uroporphyrinogen III synthase.
  
 
 0.848
A0A2T2N833
Alpha/beta-hydrolase.
  
 
 0.838
A0A2T2N866
Alpha/beta-hydrolase.
  
 
 0.838
A0A2T2N8P7
Epoxide hydrolase.
  
 
 0.838
A0A2T2NBD8
Alpha/beta-hydrolase.
  
 
 0.838
A0A2T2NLA4
HAD-like protein.
  
 
 0.838
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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