STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NEV4RNA-binding domain-containing protein. (558 aa)    
Predicted Functional Partners:
A0A2T2P0V0
Ribosomal protein L1.
   
 
 0.999
A0A2T2P6R7
CP-type G domain-containing protein.
   
 
 0.998
A0A2T2NCA9
Ribosome biogenesis protein-like protein RPF2.
   
 
 0.997
A0A2T2NLK9
Ebp2-domain-containing protein.
   
 
 0.997
A0A2T2NP32
Noc2-domain-containing protein.
   
 
 0.997
A0A2T2NUY8
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.997
A0A2T2P0D7
Brix-domain-containing protein.
   
 
 0.997
A0A2T2P3M3
RNA helicase.
   
 
 0.997
A0A2T2P8D6
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.997
A0A2T2N303
NOL1/NOP2/sun family putative RNA met; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.996
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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