STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NEX42-methylcitrate dehydratase. (549 aa)    
Predicted Functional Partners:
A0A2T2P6Y7
SH3-domain-containing protein.
 
      0.637
A0A2T2NK74
Bystin-domain-containing protein.
   
  0.582
A0A2T2NVL5
DUF663-domain-containing protein.
   
  0.579
MET3
Sulfate adenylyltransferase; Catalyzes the first intracellular reaction of sulfate assimilation, forming adenosine-5'-phosphosulfate (APS) from inorganic sulfate and ATP. Plays an important role in sulfate activation as a component of the biosynthesis pathway of sulfur-containing amino acids. In the N-terminal section; belongs to the sulfate adenylyltransferase family.
 
      0.577
A0A2T2NEJ3
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
  0.569
A0A2T2P895
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
    
  0.569
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
    
  0.566
A0A2T2NR00
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.566
A0A2T2NCW1
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
  0.556
A0A2T2N9J3
C-8 sterol isomerase.
   
 0.554
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.