STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NG89Uncharacterized protein. (1355 aa)    
Predicted Functional Partners:
A0A2T2N7E3
RING-type domain-containing protein.
    
 
 0.971
A0A2T2NL91
Ribosomal_L18_c domain-containing protein.
    
   0.927
A0A2T2N382
60S ribosomal protein L23.
    
   0.923
A0A2T2P4Z3
Ribosomal protein L24.
    
   0.921
A0A2T2P632
Uncharacterized protein.
    
   0.911
A0A2T2NGN3
Translation factor.
      0.909
A0A2T2NNZ6
50S ribosomal protein-like protein L13.
   
   0.866
A0A2T2NRI0
Ribosomal protein L13.
   
   0.866
A0A2T2PCS0
Ribosomal protein L2.
    
   0.862
A0A2T2N8G6
60s ribosomal protein-like protein l9.
    
   0.855
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.