STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NKJ3Uncharacterized protein. (181 aa)    
Predicted Functional Partners:
A0A2T2NKN0
POT1PC domain-containing protein.
    
 0.943
A0A2T2NGK7
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 
 0.849
A0A2T2NRD0
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
   
 
 0.836
A0A2T2NKT5
Pseudouridine synthase.
    
 0.833
A0A2T2P0D0
Centromere/microtubule-binding protein-like protein cbf5.
    
 0.833
A0A2T2P6D9
WD40 repeat-like protein.
    
 0.824
A0A2T2NKT6
L30e-like protein.
    
 0.808
A0A2T2MZ86
EST1_DNA_bind domain-containing protein.
   
 
 0.790
A0A2T2PB02
Uncharacterized protein.
   
 
 0.790
A0A2T2NXG9
Zn(2)-C6 fungal-type domain-containing protein.
    
 
 0.696
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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