STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NKS1Cell division cycle protein 48; Belongs to the AAA ATPase family. (816 aa)    
Predicted Functional Partners:
A0A2T2PCM4
SEP-domain-containing protein.
   
 0.974
A0A2T2P0G8
Ubiquitin fusion degradation protein-like protein 1.
    
 0.957
A0A2T2NZV2
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.954
A0A2T2ND54
Uncharacterized protein.
    
 0.953
A0A2T2NBC6
OTU-domain-containing protein.
   
 0.952
A0A2T2N304
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.951
A0A2T2NAZ4
RING-type domain-containing protein.
    
 0.951
A0A2T2NMD8
HCP-like protein.
   
 0.951
A0A2T2NHC1
UBX domain-containing protein.
    
 0.938
A0A2T2N683
Polyubiquitin.
   
 0.935
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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