STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NLA1Spermidine synthase; Belongs to the spermidine/spermine synthase family. (292 aa)    
Predicted Functional Partners:
A0A2T2P025
Saccharopine dehydrogenase-like protein.
   
 0.970
A0A2T2NJQ3
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 0.923
A0A2T2NG33
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.922
A0A2T2PAM3
S-adenosylmethionine decarboxylase.
    
 0.908
A0A2T2PBW0
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
  
 
 0.906
A0A2T2N8H9
Arginase family protein; Belongs to the arginase family.
  
 
 0.892
A0A2T2NDL5
Putative agmatinase; Belongs to the arginase family.
  
 
 0.892
A0A2T2NZN4
Arginase/deacetylase; Belongs to the arginase family.
  
 
 0.892
A0A2T2P712
Arginase/deacetylase; Belongs to the arginase family.
  
 
 0.892
A0A2T2PB91
Arginase family protein; Belongs to the arginase family.
  
 
 0.892
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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