STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NRI0Ribosomal protein L13. (202 aa)    
Predicted Functional Partners:
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.999
A0A2T2N382
60S ribosomal protein L23.
  
 0.999
A0A2T2N5V9
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
  
 0.999
A0A2T2N6M3
Cytosolic large ribosomal subunit protein L7A.
  
 0.999
A0A2T2N7I9
KOW domain-containing protein.
  
 0.999
A0A2T2N8G6
60s ribosomal protein-like protein l9.
  
 0.999
A0A2T2NAK3
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.999
A0A2T2NB76
Ribosomal protein S1.
  
 0.999
A0A2T2NC96
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
A0A2T2NCA2
Ribosomal protein 60S; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.999
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.