STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NS60Glycerate kinase. (452 aa)    
Predicted Functional Partners:
A0A2T2NH50
Allantoinase.
 
 
    0.899
A0A2T2N765
Cullin repeat-containing protein; Belongs to the cullin family.
   
 0.794
A0A2T2N8J7
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.794
A0A2T2NYY1
Cullin-2; Belongs to the cullin family.
   
 0.794
A0A2T2NEX8
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.758
A0A2T2P1N2
RING/U-box.
    
 0.716
A0A2T2N683
Polyubiquitin.
    
 0.685
A0A2T2NMR7
26S proteasome subunit P45; Belongs to the AAA ATPase family.
   
  0.680
A0A2T2P0N9
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
  0.680
A0A2T2N5Z0
Putative proteasome regulatory particle subunit Rpt1; Belongs to the AAA ATPase family.
   
  0.644
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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