STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NSI0ARM repeat-containing protein. (920 aa)    
Predicted Functional Partners:
A0A2T2P0F5
Ribonuclease H-like protein.
    
 
 0.781
A0A2T2NBM8
ATP-dependent RNA helicase-like protein dhh1; Belongs to the DEAD box helicase family.
    
 
 0.655
A0A2T2P5Q0
ARM repeat-containing protein.
    
 
 0.651
A0A2T2NCC4
Endo/exonuclease/phosphatase domain-containing protein.
    
 
 0.639
A0A2T2P2Z0
RRM domain-containing protein.
     
 0.599
A0A2T2P608
TPR-like protein.
    
  0.598
A0A2T2P5C9
RNB-domain-containing protein.
   
   0.597
A0A2T2NSB8
SKIP_SNW domain-containing protein.
    
  0.557
A0A2T2N787
Rhamnogalacturonan lyase.
    
  0.550
A0A2T2N284
RhoGAP-domain-containing protein.
    
 
 0.512
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.