STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NTA6Sfi1-domain-containing protein. (1172 aa)    
Predicted Functional Partners:
A0A2T2NFQ3
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.876
A0A2T2NW07
Valyl-tRNA synthetase-like protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.750
A0A2T2P0E0
Glycyl-tRNA synthetase-like protein.
   
  
 0.737
A0A2T2N520
Uncharacterized protein.
  
  
 0.723
A0A2T2NRB3
Lysine--tRNA ligase.
  
 
 0.722
A0A2T2P2Q9
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.708
A0A2T2P1L9
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.701
A0A2T2NIH6
Phenylalanyl-tRNA synthetase alpha chain.
   
 
 0.682
A0A2T2NE10
Phenylalanyl-tRNA synthetase mitochondrial.
   
 
 0.680
A0A2T2NML4
Lysyl-tRNA synthetase-like protein.
  
 
 0.668
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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