STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NUI8P-loop containing nucleoside triphosphate hydrolase protein. (542 aa)    
Predicted Functional Partners:
A0A2T2N9L1
DNA repair protein rad18.
    
 
 0.858
A0A2T2NJE7
3'-5' exonuclease domain-containing protein.
   
 
 0.816
A0A2T2PA11
Ribonuclease H-like protein.
   
 
 0.816
A0A2T2N642
Centrin-3.
 
      0.747
A0A2T2N5Y5
DNA polymeras-like protein subunit delta-2.
    
 
 0.698
A0A2T2N2V5
Uncharacterized protein.
    
 
 0.653
A0A2T2NX18
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.578
A0A2T2NBE2
PIN domain-like protein.
  
  
 0.535
A0A2T2NV21
P-loop containing nucleoside triphosphate hydrolase protein.
  
 
 0.526
A0A2T2NZE9
Pectin lyase-like protein.
  
 
 0.526
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.