STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2NZR1Cyclin-like protein. (423 aa)    
Predicted Functional Partners:
A0A2T2N4Q5
Serine/threonine-protein kinase crk1; Belongs to the protein kinase superfamily.
    
 0.999
A0A2T2PBX8
CDK-activating kinase assembly factor.
   
 0.999
A0A2T2P6P2
RNA polymerase II transcription factor-like protein B subunit 4.
   
 0.998
A0A2T2N8K7
TFIIH basal transcription factor complex helicase subunit.
    
 0.996
A0A2T2P764
Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase.
    
 0.996
A0A2T2P8V1
HTH TFE/IIEalpha-type domain-containing protein.
    
 0.996
A0A2T2N633
RNA polymerase II transcription factor.
    
 0.995
A0A2T2NSP8
C2H2-type domain-containing protein.
   
 0.995
A0A2T2P9U9
DNA repair helicase rad25.
    
 0.995
A0A2T2NPG7
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.994
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.