A0A2T2NZX1 protein (Corynespora cassiicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T2NZX1

Uncharacterized protein. (617 aa)

Predicted Functional Partners:

A0A2T2NBT4

0.959

A0A2T2N9U1

0.958

A0A2T2NWG1

0.952

A0A2T2P9H3

0.950

A0A2T2NFT9

0.941

A0A2T2NX91

0.939

A0A2T2N5G8

0.924

A0A2T2P929

0.905

A0A2T2NSQ2

0.902

CLP1

0.893

Your Current Organism:

Corynespora cassiicola

NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A2T2N5G8	A0A2T2N9U1	A0A2T2N5G8	A0A2T2N9U1	Uncharacterized protein.	Fip1 domain-containing protein.	0.998
A0A2T2N5G8	A0A2T2NBT4	A0A2T2N5G8	A0A2T2NBT4	Uncharacterized protein.	mRNA 3'-end-processing protein rna-14.	0.997
A0A2T2N5G8	A0A2T2NFT9	A0A2T2N5G8	A0A2T2NFT9	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.998
A0A2T2N5G8	A0A2T2NSQ2	A0A2T2N5G8	A0A2T2NSQ2	Uncharacterized protein.	CID domain-containing protein.	0.997
A0A2T2N5G8	A0A2T2NWG1	A0A2T2N5G8	A0A2T2NWG1	Uncharacterized protein.	DUF3453 domain-containing protein.	0.980
A0A2T2N5G8	A0A2T2NX91	A0A2T2N5G8	A0A2T2NX91	Uncharacterized protein.	Protein CFT1.	0.998
A0A2T2N5G8	A0A2T2NZX1	A0A2T2N5G8	A0A2T2NZX1	Uncharacterized protein.	Uncharacterized protein.	0.924
A0A2T2N5G8	A0A2T2P929	A0A2T2N5G8	A0A2T2P929	Uncharacterized protein.	WD40 repeat-like protein.	0.988
A0A2T2N5G8	A0A2T2P9H3	A0A2T2N5G8	A0A2T2P9H3	Uncharacterized protein.	Uncharacterized protein.	0.998
A0A2T2N5G8	CLP1	A0A2T2N5G8	A0A2T2N9L4	Uncharacterized protein.	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	0.997
A0A2T2N9U1	A0A2T2N5G8	A0A2T2N9U1	A0A2T2N5G8	Fip1 domain-containing protein.	Uncharacterized protein.	0.998
A0A2T2N9U1	A0A2T2NBT4	A0A2T2N9U1	A0A2T2NBT4	Fip1 domain-containing protein.	mRNA 3'-end-processing protein rna-14.	0.998
A0A2T2N9U1	A0A2T2NFT9	A0A2T2N9U1	A0A2T2NFT9	Fip1 domain-containing protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
A0A2T2N9U1	A0A2T2NSQ2	A0A2T2N9U1	A0A2T2NSQ2	Fip1 domain-containing protein.	CID domain-containing protein.	0.979
A0A2T2N9U1	A0A2T2NWG1	A0A2T2N9U1	A0A2T2NWG1	Fip1 domain-containing protein.	DUF3453 domain-containing protein.	0.999
A0A2T2N9U1	A0A2T2NX91	A0A2T2N9U1	A0A2T2NX91	Fip1 domain-containing protein.	Protein CFT1.	0.999
A0A2T2N9U1	A0A2T2NZX1	A0A2T2N9U1	A0A2T2NZX1	Fip1 domain-containing protein.	Uncharacterized protein.	0.958
A0A2T2N9U1	A0A2T2P929	A0A2T2N9U1	A0A2T2P929	Fip1 domain-containing protein.	WD40 repeat-like protein.	0.999
A0A2T2N9U1	A0A2T2P9H3	A0A2T2N9U1	A0A2T2P9H3	Fip1 domain-containing protein.	Uncharacterized protein.	0.999
A0A2T2N9U1	CLP1	A0A2T2N9U1	A0A2T2N9L4	Fip1 domain-containing protein.	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	0.972