STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P1R3BTB domain-containing protein. (260 aa)    
Predicted Functional Partners:
A0A2T2N4E9
Uncharacterized protein.
    
 0.885
A0A2T2N4P1
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.835
A0A2T2N3T8
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.828
A0A2T2P2K6
Uncharacterized protein.
    
 0.818
A0A2T2NFZ6
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.813
A0A2T2N683
Polyubiquitin.
    
 0.806
A0A2T2N438
Clathrin adaptor, mu subunit; Belongs to the adaptor complexes medium subunit family.
    
 0.800
A0A2T2NYJ8
ANTH-domain-containing protein.
    
 0.790
A0A2T2N649
ENTH-domain-containing protein.
   
 0.787
A0A2T2NEZ5
WH1-domain-containing protein.
    
 0.776
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.