A0A2T2P230 protein (Corynespora cassiicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2T2P230

Zinc-binding alcohol dehydrogenase-like protein. (339 aa)

Predicted Functional Partners:

A0A2T2N2W5

0.689

A0A2T2MZ77

0.577

A0A2T2MZ56

0.555

A0A2T2P2C1

0.517

A0A2T2NCQ1

0.486

A0A2T2NJ35

0.448

A0A2T2P271

0.445

A0A2T2MZW4

0.430

A0A2T2MZ59

0.426

A0A2T2MZ81

0.426

Your Current Organism:

Corynespora cassiicola

NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2T2MZ56	A0A2T2MZ59	Beta-ketoacyl synthase.	PKS_DH domain-containing protein.	0.492
A0A2T2MZ56	A0A2T2MZ77	Beta-ketoacyl synthase.	Uncharacterized protein.	0.974
A0A2T2MZ56	A0A2T2MZ81	Beta-ketoacyl synthase.	PKS_DH domain-containing protein.	0.921
A0A2T2MZ56	A0A2T2MZW4	Beta-ketoacyl synthase.	KR-domain-containing protein.	0.974
A0A2T2MZ56	A0A2T2N2W5	Beta-ketoacyl synthase.	Ketoacyl-synt-domain-containing protein.	0.521
A0A2T2MZ56	A0A2T2NCQ1	Beta-ketoacyl synthase.	NAD(P)-binding protein.	0.764
A0A2T2MZ56	A0A2T2P230	Beta-ketoacyl synthase.	Zinc-binding alcohol dehydrogenase-like protein.	0.555
A0A2T2MZ59	A0A2T2MZ56	PKS_DH domain-containing protein.	Beta-ketoacyl synthase.	0.492
A0A2T2MZ59	A0A2T2NCQ1	PKS_DH domain-containing protein.	NAD(P)-binding protein.	0.509
A0A2T2MZ59	A0A2T2P230	PKS_DH domain-containing protein.	Zinc-binding alcohol dehydrogenase-like protein.	0.426
A0A2T2MZ77	A0A2T2MZ56	Uncharacterized protein.	Beta-ketoacyl synthase.	0.974
A0A2T2MZ77	A0A2T2MZ81	Uncharacterized protein.	PKS_DH domain-containing protein.	0.823
A0A2T2MZ77	A0A2T2MZW4	Uncharacterized protein.	KR-domain-containing protein.	0.950
A0A2T2MZ77	A0A2T2NCQ1	Uncharacterized protein.	NAD(P)-binding protein.	0.509
A0A2T2MZ77	A0A2T2P230	Uncharacterized protein.	Zinc-binding alcohol dehydrogenase-like protein.	0.577
A0A2T2MZ81	A0A2T2MZ56	PKS_DH domain-containing protein.	Beta-ketoacyl synthase.	0.921
A0A2T2MZ81	A0A2T2MZ77	PKS_DH domain-containing protein.	Uncharacterized protein.	0.823
A0A2T2MZ81	A0A2T2MZW4	PKS_DH domain-containing protein.	KR-domain-containing protein.	0.663
A0A2T2MZ81	A0A2T2NCQ1	PKS_DH domain-containing protein.	NAD(P)-binding protein.	0.509
A0A2T2MZ81	A0A2T2P230	PKS_DH domain-containing protein.	Zinc-binding alcohol dehydrogenase-like protein.	0.426