STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P3B2Transcription factor SPT8. (646 aa)    
Predicted Functional Partners:
A0A2T2NBR8
Bromo domain-containing protein.
    
 
 0.981
A0A2T2N7I1
Uncharacterized protein.
    
 
 0.950
A0A2T2P228
Uncharacterized protein.
    
 
 0.941
A0A2T2PA19
TAF-domain-containing protein.
    
 
 0.940
A0A2T2NB14
WD40 repeat-like protein.
    
 
 0.929
A0A2T2PCT3
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.924
A0A2T2PB64
Uncharacterized protein.
    
 
 0.919
A0A2T2NUU3
Transcriptional adapter 2; Functions as component of the transcription regulatory histone acetylation (HAT) complexes SAGA, SALSA and ADA. SAGA is involved in RNA polymerase II-dependent transcriptional regulation.
    
 
 0.914
A0A2T2NBS2
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.905
A0A2T2NG18
TFIID_20kDa domain-containing protein.
    
 
 0.889
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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