STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P3I2Isocitrate lyase. (535 aa)    
Predicted Functional Partners:
A0A2T2NDX7
Malate synthase; Belongs to the malate synthase family.
 
 
 0.997
A0A2T2NCQ0
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.881
A0A2T2NTN1
PLP-dependent transferase.
  
 
 0.876
A0A2T2P4V5
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.851
A0A2T2NEK2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.803
A0A2T2NFG1
(S)-2-hydroxy-acid oxidase.
   
 
  0.800
A0A2T2NMI2
FAD dependent oxidoreductase.
   
 
 0.787
A0A2T2N898
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.782
A0A2T2NUF7
Isocitrate lyase.
  
  
 
0.780
A0A2T2NJB4
Aldolase; Belongs to the DapA family.
   
 
  0.773
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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