STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P6I2Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
A0A2T2NXW5
Slu7 domain-containing protein.
   
 
  0.895
A0A2T2NX93
WD40 repeat-like protein.
   
 
  0.878
A0A2T2P516
RRM domain-containing protein.
   
  0.866
A0A2T2P6F9
RNA-binding domain-containing protein.
   
  0.853
A0A2T2NM03
DUF1754-domain-containing protein.
    
  0.836
A0A2T2NDU2
MIF4G-domain-containing protein.
    
  0.827
A0A2T2P445
DUF1168-domain-containing protein.
   
 
  0.817
A0A2T2P561
RING-type domain-containing protein.
 
      0.810
A0A2T2N943
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.688
A0A2T2NC14
ATP-dependent RNA helicase-like protein.
    
  0.684
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.