STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P6P3Leptomycin B resistance protein pmd1. (1315 aa)    
Predicted Functional Partners:
A0A2T2P3I8
Uncharacterized protein.
   
 0.643
A0A2T2NL90
Uncharacterized protein.
   
  
 0.630
A0A2T2N756
Tryptophan synthase.
  
   0.610
A0A2T2P753
AlcB domain-containing protein.
 
   
 0.596
A0A2T2NXW9
ANTH-domain-containing protein.
    
 0.559
A0A2T2NYL3
Ubiquitin carboxyl-terminal hydrolase.
    
  0.532
A0A2T2P1U6
Uncharacterized protein; Belongs to the peptidase M16 family.
   
 0.520
A0A2T2NIU3
26S proteasome-like protein regulatory subunit.
    
  0.511
A0A2T2N218
RING-type domain-containing protein.
    
  0.498
A0A2T2NSW5
Cytochrome b-c1 complex subunit 2.
   
 0.484
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.