STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2P8W8TRAUB-domain-containing protein. (477 aa)    
Predicted Functional Partners:
A0A2T2ND72
Nop14-like protein.
   
 
 0.998
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
A0A2T2P849
Utp14-domain-containing protein.
   
 
 0.998
A0A2T2N7D5
NUC189-domain-containing protein.
   
 
 0.997
A0A2T2N7I7
WD40 repeat-like protein.
   
   0.997
A0A2T2NGR5
Uncharacterized protein.
   
 
 0.997
A0A2T2NJP3
Pre-rRNA-processing protein PNO1.
   
 
 0.997
A0A2T2NUM9
BING4CT-domain-containing protein.
   
 
 0.997
A0A2T2P0Y6
DUF663-domain-containing protein.
   
 
 0.997
A0A2T2PBP5
WD40 repeat-like protein.
   
 
 0.997
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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