STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T2PCU6Uncharacterized protein. (585 aa)    
Predicted Functional Partners:
A0A2T2NM53
Uncharacterized protein.
  
 
 0.676
A0A2T2NF49
Insert subdomain of RNA polymerase alpha subunit.
   
 0.651
A0A2T2NQ90
Actin-like ATPase domain-containing protein; Belongs to the actin family.
    
 0.638
A0A2T2N8D7
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.634
A0A2T2NX29
RNA polymerase Rpb6.
    
 0.630
A0A2T2NQ34
YL1_C domain-containing protein.
    
 0.623
A0A2T2P9T9
WD40 repeat-like protein.
    
 0.620
A0A2T2N277
RPOL4c domain-containing protein.
    
 0.619
A0A2T2N8S8
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.619
A0A2T2NGP4
RPB5 subunit of DNA-directed RNA polymerase.
    
  0.619
Your Current Organism:
Corynespora cassiicola
NCBI taxonomy Id: 1448308
Other names: C. cassiicola Philippines, Corynespora cassiicola INRA-Clermont Ferrand, Corynespora cassiicola Philippines
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