Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A319BU58 | A0A319C3Z6 | Tryptophan synthase. | Putative pyridoxal phosphate-dependent enzyme. | 0.654 |
A0A319BU58 | A0A319CLY8 | Tryptophan synthase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.801 |
A0A319BU58 | A0A319D1Q6 | Tryptophan synthase. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.862 |
A0A319BU58 | A0A319DMY2 | Tryptophan synthase. | Tryptophan synthase. | 0.999 |
A0A319C3Z6 | A0A319BU58 | Putative pyridoxal phosphate-dependent enzyme. | Tryptophan synthase. | 0.654 |
A0A319C3Z6 | A0A319C4N4 | Putative pyridoxal phosphate-dependent enzyme. | Aldo/keto reductase. | 0.453 |
A0A319C3Z6 | A0A319C5F9 | Putative pyridoxal phosphate-dependent enzyme. | Glutathione synthetase. | 0.437 |
A0A319C3Z6 | A0A319CF69 | Putative pyridoxal phosphate-dependent enzyme. | Glutamate cysteine ligase. | 0.564 |
A0A319C3Z6 | A0A319CHU1 | Putative pyridoxal phosphate-dependent enzyme. | DHFR domain-containing protein; Belongs to the dihydrofolate reductase family. | 0.445 |
A0A319C3Z6 | A0A319CLY8 | Putative pyridoxal phosphate-dependent enzyme. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.438 |
A0A319C3Z6 | A0A319D132 | Putative pyridoxal phosphate-dependent enzyme. | Glutamate-cysteine ligase Gcs1. | 0.564 |
A0A319C3Z6 | A0A319D1Q6 | Putative pyridoxal phosphate-dependent enzyme. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.485 |
A0A319C3Z6 | A0A319DAV4 | Putative pyridoxal phosphate-dependent enzyme. | Glutathione synthetase. | 0.437 |
A0A319C3Z6 | A0A319DMY2 | Putative pyridoxal phosphate-dependent enzyme. | Tryptophan synthase. | 0.654 |
A0A319C4N4 | A0A319C3Z6 | Aldo/keto reductase. | Putative pyridoxal phosphate-dependent enzyme. | 0.453 |
A0A319C5F9 | A0A319C3Z6 | Glutathione synthetase. | Putative pyridoxal phosphate-dependent enzyme. | 0.437 |
A0A319C5F9 | A0A319CF69 | Glutathione synthetase. | Glutamate cysteine ligase. | 0.770 |
A0A319C5F9 | A0A319D132 | Glutathione synthetase. | Glutamate-cysteine ligase Gcs1. | 0.912 |
A0A319C5F9 | A0A319DAV4 | Glutathione synthetase. | Glutathione synthetase. | 0.864 |
A0A319CF69 | A0A319C3Z6 | Glutamate cysteine ligase. | Putative pyridoxal phosphate-dependent enzyme. | 0.564 |
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