STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A319EDC4CDC73-domain-containing protein. (474 aa)    
Predicted Functional Partners:
A0A319ED76
Uncharacterized protein.
   
 0.998
A0A319EV29
Paf1-domain-containing protein.
   
 0.998
A0A319EIA7
HCP-like protein.
   
 0.997
A0A319ECU2
SPT16-domain-containing protein.
   
 0.995
A0A319E425
WD domain protein.
    
 0.992
A0A319EEU6
Plus-3-domain-containing protein.
   
 0.992
A0A319EW08
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
   
 0.992
A0A319EM80
Uncharacterized protein.
   
 0.976
A0A319DU84
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.972
A0A319EZC1
Histone H2B; Belongs to the histone H2B family.
    
 0.964
Your Current Organism:
Aspergillus sclerotiicarbonarius
NCBI taxonomy Id: 1448318
Other names: A. sclerotiicarbonarius CBS 121057, Aspergillus sclerotiicarbonarius CBS 121057
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