STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A319D0Z9Pre-mRNA splicing factor Clf1. (714 aa)    
Predicted Functional Partners:
A0A319E8L7
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.681
A0A319DJF1
Putative DNA repair protein RAD1.
    
 0.661
A0A319D8P1
Endonuclease MUS81.
   
 0.631
A0A319CX70
Ribonuclease P protein subunit.
   
  0.602
A0A319DI30
Uncharacterized protein.
   
  0.598
A0A319E2K6
Putative ribonuclease P complex subunit Pop2.
    
 0.598
A0A319EAD4
Putative ribonuclease P complex subunit Pop1.
    
 0.598
A0A319DMU2
Uncharacterized protein.
    
  0.597
A0A319CTP2
Uncharacterized protein.
   
  0.584
A0A319CU55
Uncharacterized protein.
   
  0.584
Your Current Organism:
Aspergillus ellipticus
NCBI taxonomy Id: 1448320
Other names: A. ellipticus CBS 707.79, Aspergillus ellipticus CBS 707.79
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.