Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A319D8Y2 | A0A319DA55 | Ubiquitin-like protein. | DUF726 domain protein. | 0.408 |
A0A319D8Y2 | A0A319DD82 | Ubiquitin-like protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.945 |
A0A319DA55 | A0A319D8Y2 | DUF726 domain protein. | Ubiquitin-like protein. | 0.408 |
A0A319DA55 | A0A319DD82 | DUF726 domain protein. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.529 |
A0A319DA55 | A0A319DQ96 | DUF726 domain protein. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.408 |
A0A319DA55 | A0A319E8W6 | DUF726 domain protein. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.408 |
A0A319DD82 | A0A319D8Y2 | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | Ubiquitin-like protein. | 0.945 |
A0A319DD82 | A0A319DA55 | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | DUF726 domain protein. | 0.529 |
A0A319DD82 | A0A319DQ96 | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.945 |
A0A319DD82 | A0A319E8W6 | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | 0.959 |
A0A319DQ96 | A0A319DA55 | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | DUF726 domain protein. | 0.408 |
A0A319DQ96 | A0A319DD82 | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.945 |
A0A319E8W6 | A0A319DA55 | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | DUF726 domain protein. | 0.408 |
A0A319E8W6 | A0A319DD82 | AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration. | AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. | 0.959 |