STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A317VT08Pectin lyase-like protein. (321 aa)    
Predicted Functional Partners:
A0A317VHL6
Endopolygalacturonase D.
     
 0.912
A0A317V0M0
Polygalacturonase pgaI.
     
 0.906
A0A317WEF9
Glycoside hydrolase.
     
 0.846
A0A317VBG3
Endopolygalacturonase.
     
 0.844
A0A317VSY3
Pectinesterase; Involved in maceration and soft-rotting of plant tissue.
   
 
 0.836
A0A317WGU1
Exopolygalacturonase X; Belongs to the glycosyl hydrolase 28 family.
     
 0.825
A0A317V7V2
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
   
 0.748
A0A317VAR5
Uncharacterized protein.
   
 0.748
A0A317V724
Ubiquitin ligase subunit HrtA.
    
 0.721
A0A317VVA3
Cullin-domain-containing protein; Belongs to the cullin family.
    
 0.710
Your Current Organism:
Aspergillus heteromorphus
NCBI taxonomy Id: 1448321
Other names: A. heteromorphus CBS 117.55, Aspergillus heteromorphus CBS 117.55
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.