STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000524475_00355Unannotated protein. (369 aa)    
Predicted Functional Partners:
GCA_000524475_00354
Unannotated protein.
       0.809
GCA_000524475_02762
Unannotated protein.
  
 
 0.701
GCA_000524475_00353
Unannotated protein.
       0.667
GCA_000524475_00728
Unannotated protein.
  
     0.589
GCA_000524475_00352
Unannotated protein.
       0.587
GCA_000524475_00356
Unannotated protein.
       0.556
GCA_000524475_00357
Unannotated protein.
       0.556
GCA_000524475_00892
Unannotated protein.
     
 0.553
GCA_000524475_03347
Unannotated protein.
  
     0.513
GCA_000524475_03513
Unannotated protein.
  
 
 0.495
Your Current Organism:
Tomitella biformata
NCBI taxonomy Id: 1448389
Other names: T. biformata AHU 1821, Tomitella biformata AHU 1821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.