STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000524475_03135Unannotated protein. (173 aa)    
Predicted Functional Partners:
GCA_000524475_03134
Unannotated protein.
       0.693
GCA_000524475_00713
Unannotated protein.
  
  
  0.658
GCA_000524475_01945
Unannotated protein.
    
 0.626
GCA_000524475_01965
Unannotated protein.
    
 0.626
GCA_000524475_03133
Unannotated protein.
       0.505
GCA_000524475_00578
Unannotated protein.
  
 
  0.438
GCA_000524475_00898
Unannotated protein.
  
 
 0.427
GCA_000524475_01112
Unannotated protein.
  
 
  0.425
GCA_000524475_01692
Unannotated protein.
  
 
  0.425
GCA_000524475_02223
Unannotated protein.
  
 
  0.425
Your Current Organism:
Tomitella biformata
NCBI taxonomy Id: 1448389
Other names: T. biformata AHU 1821, Tomitella biformata AHU 1821
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.